Detailed information of matrix profile MA1599.1

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Profile summary
Name: ZNF682
Matrix ID: MA1599.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc finger factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 28092692
Uniprot ID: O95780  
Source: 30462313
Comment: Matches motif derived from SmiLE-seq

Sequence logo

Frequency matrix

         
A [ 412 180 456 64 7 11 33 7 6 13 358 58 36 89 171 216 ]
C [ 194 300 118 32 10 9 13 1038 22 20 55 105 877 774 349 214 ]
G [ 260 254 117 896 1034 1033 999 7 31 72 597 795 42 85 234 423 ]
T [ 192 324 367 66 7 5 13 6 999 953 48 100 103 110 304 205 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1599.1 MA1599 1 ZNF682 Homo sapiens
More than 3 adjacent zinc finger factors C2H2 zinc finger factors
     

log(P-value) = -315.847

TFFM details

TFFM ID: TFFM0645.1

ChIP-seq Centrality
log(P-value): -930.362

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0645.1

ChIP-seq Centrality
log(P-value): -802.685

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: