Detailed information of matrix profile MA1618.1

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Profile summary
Name: Ptf1a
Matrix ID: MA1618.1
Class: Basic helix-loop-helix factors (bHLH)
Family: Tal-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 23754747
Uniprot ID: Q9QX98  
Source: 30462313
Comment:

Sequence logo

Frequency matrix

         
A [ 3622 3685 8294 8564 210 13973 148 653 106 172 726 2735 3699 ]
C [ 3376 3664 2295 2854 13868 118 437 13072 153 130 2414 3568 3661 ]
G [ 3689 3601 2341 2058 122 224 1724 466 118 14006 2747 3662 2989 ]
T [ 3754 3491 1511 965 241 126 12132 250 14064 133 8554 4476 4092 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1618.1 MA1618 1 Ptf1a Mus musculus
Tal-related factors Basic helix-loop-helix factors (bHLH)
     

log(P-value) = -6906.02

TFFM details

TFFM ID: TFFM0567.1

ChIP-seq Centrality
log(P-value): -19229.0

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0567.1

ChIP-seq Centrality
log(P-value): -19289.6

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: