Detailed information of matrix profile MA1620.1

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Profile summary
Name: Ptf1a(var.3)
Matrix ID: MA1620.1
Class: Basic helix-loop-helix factors (bHLH)
Family: Tal-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 23754747
Uniprot ID: Q9QX98  
Source: 30462313
Comment:

Sequence logo

Frequency matrix

         
A [ 2811 2745 6633 142 10014 129 426 114 107 826 1599 2324 ]
C [ 2183 3341 1516 9972 98 294 1182 84 113 1410 2379 2664 ]
G [ 3004 2527 1615 109 94 9612 8567 60 9887 1188 3700 2469 ]
T [ 2293 1678 527 68 85 256 116 10033 184 6867 2613 2834 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1620.1 MA1620 1 Ptf1a(var.3) Mus musculus
Tal-related factors Basic helix-loop-helix factors (bHLH)
     

log(P-value) = -3539.04

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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