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Detailed information of matrix profile
MA1694.1
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Matrix > MA1694.1
Profile summary
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Name:
ARF35
Matrix ID:
MA1694.1
Class:
B3 domain
Family:
Collection:
CORE
Taxon:
Plants
Species:
Zea mays
Data Type:
DAP-seq
Validation:
24485461
Uniprot ID:
Source:
30375394
Comment:
The motif matches the TGTC core motif associated to ARF TFs.
Sequence logo
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Frequency matrix
JASPAR
TRANSFAC
MEME
RAW PFM
Reverse comp.
A [
1326
1011
2144
744
250
330
37
4934
7
4709
3063
955
1548
1377
]
C [
1297
1549
1043
2700
4409
4521
15
16
4975
253
556
905
1161
1285
]
G [
1351
1219
1014
1101
122
117
4934
58
23
39
856
2699
1382
935
]
T [
1048
1243
821
477
241
54
36
14
17
21
547
463
931
1425
]
Binding sites information
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Version information
ChIP-seq centrality
First order TFFM
Detailed TFFM
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More details
Matrix ID
Base ID
Version
Name
Species
Family
Class
Sequence logo
MA1694.1
MA1694
1
ARF35
Zea mays
B3 domain
JASPAR
TRANSFAC
MEME
RAW PFM
log(P-value) = -13471.1
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TFFM detailed profile doesn't exist for this profile.
Description:
Alias:
Symbol:
Consensus:
Included Models:
GC Content: