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Detailed information of matrix profile
MA1697.1
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Matrix > MA1697.1
Profile summary
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Name:
ARF4
Matrix ID:
MA1697.1
Class:
B3 domain
Family:
Collection:
CORE
Taxon:
Plants
Species:
Zea mays
Data Type:
DAP-seq
Validation:
24485461
Uniprot ID:
D9HNT1
Source:
30375394
Comment:
The motif matches the TGTC core motif associated to ARF TFs.
Sequence logo
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Frequency matrix
JASPAR
TRANSFAC
MEME
RAW PFM
Reverse comp.
A [
2014
1712
5236
375
335
6453
35
6158
5261
316
1927
1751
]
C [
1950
2246
734
5738
143
57
6524
155
667
516
1481
1750
]
G [
1732
1795
356
334
6073
112
74
271
243
5584
1918
1555
]
T [
970
913
340
219
115
44
33
82
495
250
1340
1610
]
Binding sites information
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Version information
ChIP-seq centrality
First order TFFM
Detailed TFFM
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More details
Matrix ID
Base ID
Version
Name
Species
Family
Class
Sequence logo
MA1697.1
MA1697
1
ARF4
Zea mays
B3 domain
JASPAR
TRANSFAC
MEME
RAW PFM
log(P-value) = -3121.59
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Description:
Alias:
Symbol:
Consensus:
Included Models:
GC Content: