J
20
JASPAR
2020
Toggle navigation
Cart
0
You have 0 profile(s) in cart.
Search profiles and add to cart
JASPAR Blog
Detailed information of matrix profile
MA1698.1
Home
Matrix > MA1698.1
Profile summary
Add
Name:
ARF7
Matrix ID:
MA1698.1
Class:
B3 domain
Family:
Collection:
CORE
Taxon:
Plants
Species:
Zea mays
Data Type:
DAP-seq
Validation:
24485461
Uniprot ID:
D9HNT4
Source:
30375394
Comment:
The motif matches the TGTC core motif associated to ARF TFs.
Sequence logo
Download SVG
Frequency matrix
JASPAR
TRANSFAC
MEME
RAW PFM
Reverse comp.
A [
1531
568
213
229
39
54
42
63
59
100
172
1779
818
570
]
C [
735
1756
2904
229
1196
76
176
3799
64
135
3325
463
745
752
]
G [
1001
970
529
457
173
3917
46
120
3801
3717
317
502
1727
1003
]
T [
798
771
419
3150
2657
18
3801
83
141
113
251
1321
775
1740
]
Binding sites information
HTML file
FASTA file
BED file
External links
Version information
ChIP-seq centrality
First order TFFM
Detailed TFFM
Wordclouds
More details
Matrix ID
Base ID
Version
Name
Species
Family
Class
Sequence logo
MA1698.1
MA1698
1
ARF7
Zea mays
B3 domain
JASPAR
TRANSFAC
MEME
RAW PFM
log(P-value) = -1533.03
×
TFFM first order profile doesn't exist for this profile.
×
TFFM detailed profile doesn't exist for this profile.
Description:
Alias:
Symbol:
Consensus:
Included Models:
GC Content: