Detailed information of matrix profile PB0002.1

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Profile summary
Name: Arid5a_1
Matrix ID: PB0002.1
Class: Helix-Turn-Helix
Family: Arid
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q8BI45  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 18 16 85 96 6 93 2 4 23 34 29 57 29 34 ]
C [ 43 32 3 0 0 1 1 9 3 35 13 8 18 23 ]
G [ 23 3 7 1 1 1 1 4 52 18 27 19 26 15 ]
T [ 17 48 5 2 93 6 96 83 22 12 31 16 27 27 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0002.1 PB0002 1 Arid5a_1 Mus musculus
Arid Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: