Detailed information of matrix profile PB0015.1

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Profile summary
Name: Foxa2_1
Matrix ID: PB0015.1
Class: Winged Helix-Turn-Helix
Family: Forkhead
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: P35583  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 34 41 41 61 43 9 0 92 92 99 0 99 72 54 25 31 22 ]
C [ 21 18 13 8 4 1 4 7 7 0 66 0 7 10 27 21 28 ]
G [ 13 18 9 11 15 89 0 0 0 0 0 0 5 10 30 25 25 ]
T [ 33 23 37 21 38 1 96 1 1 1 34 1 16 26 18 24 25 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0015.1 PB0015 1 Foxa2_1 Mus musculus
Forkhead Winged Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: