Detailed information of matrix profile PB0054.1

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Profile summary
Name: Rfx3_1
Matrix ID: PB0054.1
Class: Winged Helix-Turn-Helix
Family: RFX
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: P48381  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 22 26 12 11 34 19 17 1 26 0 85 4 1 94 99 0 21 32 33 30 30 42 39 ]
C [ 23 13 19 28 31 37 58 93 29 1 1 0 92 0 0 99 37 19 18 19 27 19 20 ]
G [ 15 32 17 41 12 16 13 5 13 0 14 96 0 4 0 0 32 37 23 13 10 13 13 ]
T [ 40 29 52 20 22 28 12 2 33 98 0 0 7 1 0 1 10 12 27 38 34 26 28 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0054.1 PB0054 1 Rfx3_1 Mus musculus
RFX Winged Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: