Detailed information of matrix profile PB0173.1

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Profile summary
Name: Sox21_2
Matrix ID: PB0173.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q811W0  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 17 31 27 27 18 16 64 88 2 93 92 7 36 18 43 12 16 ]
C [ 28 25 16 29 23 20 14 2 85 2 2 4 3 24 16 31 26 ]
G [ 20 20 31 22 35 62 19 2 10 2 5 2 15 42 33 26 29 ]
T [ 35 23 26 22 24 3 4 8 2 3 1 88 46 16 9 31 29 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0173.1 PB0173 1 Sox21_2 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: