Detailed information of matrix profile PB0174.1

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Profile summary
Name: Sox30_2
Matrix ID: PB0174.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q8CGW4  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 15 8 19 11 77 8 3 84 5 88 84 9 23 26 16 52 ]
C [ 38 46 20 13 11 4 6 6 5 4 4 3 40 20 12 10 ]
G [ 25 23 41 29 3 4 4 5 6 6 4 11 22 19 27 21 ]
T [ 21 23 20 47 9 84 88 5 84 3 8 77 15 35 46 17 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0174.1 PB0174 1 Sox30_2 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

Included Models:

GC Content: