Detailed information of matrix profile PB0175.1

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Profile summary
Name: Sox4_2
Matrix ID: PB0175.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q06945  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 19 23 19 21 21 54 88 1 96 95 2 4 18 24 25 20 13 ]
C [ 21 28 42 29 24 9 1 84 1 1 4 17 29 24 12 30 41 ]
G [ 16 18 10 27 20 24 1 3 1 2 1 1 10 11 16 24 25 ]
T [ 45 31 29 23 34 13 10 12 2 1 93 79 43 41 47 27 22 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0175.1 PB0175 1 Sox4_2 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: