Detailed information of matrix profile PB0177.1

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Profile summary
Name: Sox7_2
Matrix ID: PB0177.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: P40646  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 33 17 41 23 20 34 10 28 13 53 16 64 4 79 81 12 11 46 17 17 58 15 ]
C [ 20 30 46 18 27 30 57 21 56 10 34 3 62 2 4 9 7 15 27 36 15 65 ]
G [ 29 32 7 36 20 18 11 24 17 19 31 4 9 4 6 4 18 10 46 27 11 13 ]
T [ 18 20 6 23 33 18 22 27 15 18 19 30 25 14 8 75 64 29 9 21 16 7 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0177.1 PB0177 1 Sox7_2 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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