Detailed information of matrix profile PB0178.1

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Profile summary
Name: Sox8_2
Matrix ID: PB0178.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q04886  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 13 24 16 20 23 11 67 1 10 93 92 9 20 21 ]
C [ 37 28 11 20 16 57 16 6 3 2 3 2 13 21 ]
G [ 28 29 20 34 19 9 12 2 81 2 3 4 50 17 ]
T [ 23 20 52 26 42 23 5 91 6 3 2 85 17 41 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0178.1 PB0178 1 Sox8_2 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: