Detailed information of matrix profile PH0001.1

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Profile summary
Name: Alx3
Matrix ID: PH0001.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: O70137  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 20 24 15 68 42 4 0 99 99 0 0 91 47 8 25 19 54 ]
C [ 29 14 34 10 5 48 8 1 0 1 0 0 1 23 16 24 13 ]
G [ 25 19 27 15 44 1 0 0 1 0 1 8 48 15 18 20 3 ]
T [ 26 43 24 7 8 47 91 0 0 99 99 0 4 53 41 37 30 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0001.1 PH0001 1 Alx3 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: