Detailed information of matrix profile PH0011.1

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Profile summary
Name: Alx1_2
Matrix ID: PH0011.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q8C8B0  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 18 25 23 40 43 2 1 98 98 1 0 95 74 21 14 10 22 ]
C [ 21 29 32 19 20 24 4 0 0 1 1 0 1 26 10 35 20 ]
G [ 34 21 20 23 22 1 0 1 1 0 0 4 24 20 46 21 41 ]
T [ 27 26 24 17 16 74 95 0 1 98 98 1 2 32 29 33 17 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0011.1 PH0011 1 Alx1_2 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: