Detailed information of matrix profile PH0012.1

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Profile summary
Name: Cdx1
Matrix ID: PH0012.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P18111  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 33 49 43 19 5 8 25 99 0 4 71 1 7 11 20 38 ]
C [ 10 26 17 5 0 0 0 0 17 0 0 83 73 24 31 18 ]
G [ 21 11 23 11 1 0 1 0 0 47 28 3 6 25 10 15 ]
T [ 36 14 16 64 94 92 74 1 82 49 1 13 14 40 39 29 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0012.1 PH0012 1 Cdx1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Included Models:

GC Content: