Detailed information of matrix profile PH0018.1

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Profile summary
Name: Dbx1
Matrix ID: PH0018.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P52950  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 17 33 47 12 17 56 31 15 72 72 18 16 46 55 18 27 42 ]
C [ 29 19 14 22 17 10 5 9 4 7 5 8 7 10 31 5 16 ]
G [ 14 19 11 16 7 15 10 3 11 10 3 14 23 13 6 7 23 ]
T [ 40 30 28 50 59 20 54 73 13 11 74 62 24 23 46 61 19 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0018.1 PH0018 1 Dbx1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: