Detailed information of matrix profile PH0052.1

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Profile summary
Name: Hoxa5
Matrix ID: PH0052.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P09021  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 23 22 23 44 21 7 1 90 98 0 0 90 28 15 13 7 ]
C [ 36 19 10 7 11 41 9 9 1 0 0 0 45 53 15 15 ]
G [ 14 7 41 20 53 31 0 0 0 1 9 9 19 11 39 12 ]
T [ 27 52 27 29 15 21 90 0 0 98 90 1 8 21 33 66 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0052.1 PH0052 1 Hoxa5 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: