Detailed information of matrix profile PH0054.1

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Profile summary
Name: Hoxa7_1
Matrix ID: PH0054.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P02830  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 19 22 37 26 15 7 90 94 4 5 82 50 14 34 36 21 19 ]
C [ 45 21 36 20 10 11 4 0 1 1 0 24 19 16 19 24 55 ]
G [ 25 48 13 30 24 0 1 1 0 4 11 10 13 22 21 31 12 ]
T [ 11 9 15 24 50 82 5 4 94 90 7 15 54 27 24 25 14 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0054.1 PH0054 1 Hoxa7_1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

Included Models:

GC Content: