Detailed information of matrix profile PH0102.1

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Profile summary
Name: Meis1
Matrix ID: PH0102.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q60954  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 23 16 46 27 0 0 97 0 98 0 3 2 26 22 22 32 ]
C [ 17 18 9 1 0 0 0 99 0 1 51 3 36 28 21 13 ]
G [ 39 20 9 2 0 99 0 0 2 96 44 1 29 28 6 11 ]
T [ 20 45 36 70 99 0 3 1 0 2 3 95 9 23 51 43 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0102.1 PH0102 1 Meis1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: