Detailed information of matrix profile PH0175.1

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Profile summary
Name: Vax2
Matrix ID: PH0175.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q9WTP9  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 9 13 28 6 3 98 99 1 0 88 25 8 18 21 33 30 ]
C [ 17 31 41 25 3 2 0 0 0 0 12 26 21 27 19 31 ]
G [ 58 21 23 19 0 0 0 0 11 11 56 13 43 26 16 24 ]
T [ 17 34 8 50 93 0 1 98 88 1 6 53 17 26 32 16 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0175.1 PH0175 1 Vax2 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: