Detailed information of matrix profile PL0018.1

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Profile summary
Name: hlh-25
Matrix ID: PL0018.1
Class: Zipper-type
Family: Helix-Loop-Helix
Collection: PBM_HLH
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: PBM
Validation: 19632181
Uniprot ID: Q18054  
Source:
Comment: homodimer

Sequence logo

Frequency matrix

         
A [ 30 28 28 12 4 89 0 98 0 10 2 0 2 20 16 17 ]
C [ 31 16 8 1 0 10 99 0 84 0 75 0 53 48 31 25 ]
G [ 14 23 52 84 94 0 0 0 0 88 1 97 4 17 18 18 ]
T [ 22 31 10 1 0 0 0 0 15 0 21 0 39 13 32 38 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PL0018.1 PL0018 1 hlh-25 Caenorhabditis elegans
Helix-Loop-Helix Zipper-type
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: