Detailed information of matrix profile UN0055.1

  1. Home
  2. Matrix > UN0055.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: PK20555.1
Matrix ID: UN0055.1
Class: C2H2 zinc finger factors
Family: Dof-type
Collection: UNVALIDATED
Taxon: Plants
Species: Cannabis sativa
Data Type: PBM
Validation:
Uniprot ID:
Source: 31133749
Comment: not supported by literature

Sequence logo

Frequency matrix

         
A [ 270 365 461 835 821 717 46 150 312 323 ]
C [ 242 184 73 52 59 146 51 247 164 182 ]
G [ 249 235 113 36 16 67 819 209 240 270 ]
T [ 237 214 351 75 101 68 82 392 282 223 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0055.1 UN0055 1 PK20555.1 Cannabis sativa
Dof-type C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: