Detailed information of matrix profile UN0106.1

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Profile summary

Name: lin-28
Matrix ID: UN0106.1
Class: Cold-shock domain factors
Family:
Collection: UNVALIDATED
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: PBM
Validation: 22570413
Uniprot ID: P92186  
Source: 31133749
Comment: the purified XtrLin28b CSD was crystallized either alone or in complex with the ssDNA oligonucleotides dT7 (TTT TTT T) or dT6 (TTT TTT) or the ssRNA oligonucleotide rU6 (UUU UUU).

Sequence logo

Frequency matrix

         
A [ 971 971 971 971 9 971 971 971 ]
C [ 9 9 9 9 9 9 9 9 ]
G [ 9 9 9 9 9 9 9 9 ]
T [ 9 9 9 9 971 9 9 9 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0106.1 UN0106 1 lin-28 Caenorhabditis elegans
Cold-shock domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

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GC Content: