Detailed information of matrix profile UN0107.1

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Profile summary

Name: Cp190
Matrix ID: UN0107.1
Class: C2H2 zinc finger factors
Family:
Collection: UNVALIDATED
Taxon: Insects
Species: Drosophila melanogaster
Data Type: ChIP-seq
Validation:
Uniprot ID: Q24478  
Source: 30413482
Comment: Has C2H2 DBD, insulator co-factor, colocalize with Su(Hw) 10.1038/s41467-017-02525-w

Sequence logo

Frequency matrix

         
A [ 329 1019 170 779 68 40 2524 35 2852 103 102 50 239 218 942 344 191 359 640 ]
C [ 933 161 376 38 31 2821 426 102 13 2621 115 107 211 592 514 147 99 1774 227 ]
G [ 244 1491 134 217 2865 39 25 38 106 103 34 43 96 334 1111 2231 2610 615 1444 ]
T [ 1501 336 2327 1973 43 107 32 2832 36 180 2756 2807 2461 1863 440 285 107 259 696 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0107.1 UN0107 1 Cp190 Drosophila melanogaster
C2H2 zinc finger factors
     

log(P-value) = -535.287

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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