Detailed information of matrix profile UN0109.1

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Profile summary

Name: trx
Matrix ID: UN0109.1
Class: Nuclear receptors with C4 zinc fingers
Family:
Collection: UNVALIDATED
Taxon: Insects
Species: Drosophila melanogaster
Data Type: ChIP-seq
Validation:
Uniprot ID: P20659  
Source: 30413482
Comment: Contains the Nuclear receptor DBD, Histone methyltransferase

Sequence logo

Frequency matrix

         
A [ 601 757 361 105 16 11 38 26 49 340 403 640 ]
C [ 1753 1125 2321 326 3979 76 4004 57 3974 689 2374 782 ]
G [ 801 700 510 3352 28 27 6 29 12 338 459 842 ]
T [ 903 1476 866 275 35 3944 10 3946 23 2691 822 1794 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0109.1 UN0109 1 trx Drosophila melanogaster
Nuclear receptors with C4 zinc fingers
     

log(P-value) = -402.453

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: