Detailed information of matrix profile UN0124.1

  1. Home
  2. Matrix > UN0124.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: HOXB1
Matrix ID: UN0124.1
Class: Homeo domain factors
Family: HOX-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: P14653  
Source: 28473536
Comment: not supported by literature (PMID:9774637 consensus = TGATGGATGAG)

Sequence logo

Frequency matrix

         
A [ 329 0 2003 2003 0 0 2003 0 ]
C [ 448 633 262 1 0 307 0 1298 ]
G [ 575 47 253 0 0 450 412 705 ]
T [ 650 2003 0 0 2003 2003 0 71 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0124.1 UN0124 1 HOXB1 Homo sapiens
HOX-related factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: