Detailed information of matrix profile UN0125.1

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Profile summary

Name: HSF5
Matrix ID: UN0125.1
Class: Heat shock factors
Family: HSF factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: Q4G112  
Source: 28473536
Comment: not supported by literature

Sequence logo

Frequency matrix

         
A [ 485 1330 2 4309 4309 0 157 249 1139 1155 958 643 877 963 948 867 867 610 1530 1742 519 1357 187 24 23 13 2747 ]
C [ 1442 1442 26 9 18 3000 269 570 884 827 1099 1163 829 1107 1290 1464 1117 1488 886 420 2636 85 238 419 4309 1288 549 ]
G [ 536 1500 4309 0 251 30 4309 294 948 1981 1346 1604 1533 1141 1062 1197 1277 955 965 1670 487 2864 53 60 57 1777 1562 ]
T [ 2867 36 34 18 166 1309 117 4309 4309 347 906 899 1070 1099 1009 781 1047 1256 928 478 667 3 4309 4309 16 1231 511 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0125.1 UN0125 1 HSF5 Homo sapiens
HSF factors Heat shock factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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GC Content: