Detailed information of matrix profile UN0137.1

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Profile summary

Name: SOX7
Matrix ID: UN0137.1
Class: High-mobility group (HMG) domain factors
Family: SOX-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: Q9BT81  
Source: 28473536
Comment: not supported by literature (dimer); I propose to promote http://jaspar2018.genereg.net/matrix/PB0073.1

Sequence logo

Frequency matrix

         
A [ 16897 21 16897 16897 82 4452 4428 3603 16897 178 538 141 2032 ]
C [ 1340 16897 506 1654 14 1350 4099 7668 22 414 11 0 1328 ]
G [ 1308 23 4 482 9 7583 3900 1365 0 1625 514 16897 1126 ]
T [ 1957 132 524 181 16897 3512 4470 4261 61 16897 16897 0 16897 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0137.1 UN0137 1 SOX7 Homo sapiens
SOX-related factors High-mobility group (HMG) domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: