Detailed information of matrix profile UN0243.1

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Profile summary

Name: ZSCAN1
Matrix ID: UN0243.1
Class: C2H2 zinc finger factors
Family: Other factors with up to three adjacent zinc fingers
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: Q8NBB4  
Source: 28473536
Comment: not supported by literature

Sequence logo

Frequency matrix

         
A [ 16916 6962 109 688 10043 7052 55173 291 662 2829 4 0 0 34 0 30914 8673 ]
C [ 6326 9726 210 150 6753 52300 3584 121 14194 120 38 0 21 15 39311 4732 13578 ]
G [ 13228 10915 190 24548 11581 4509 637 56404 18479 55246 25 56660 0 56649 56 18326 16254 ]
T [ 20202 38909 56567 46245 39723 1669 2292 588 23337 264 56650 0 56655 5 17333 11773 18167 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0243.1 UN0243 1 ZSCAN1 Homo sapiens
Other factors with up to three adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: