Detailed information of matrix profile UN0334.1

  1. Home
  2. Matrix > UN0334.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: ZNF549
Matrix ID: UN0334.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc finger factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation:
Uniprot ID: Q6P9A3  
Source: ReMap
Comment: not supported by literature

Sequence logo

Frequency matrix

         
A [ 1241 1155 483 72 50 229 28 55 106 183 1828 1555 ]
C [ 1009 1430 349 161 4622 175 80 4364 4435 4133 713 787 ]
G [ 1575 1404 498 4489 77 128 4566 177 98 75 889 1780 ]
T [ 1002 838 3497 105 78 4295 153 231 188 436 1397 705 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0334.1 UN0334 1 ZNF549 Homo sapiens
More than 3 adjacent zinc finger factors C2H2 zinc finger factors
     

log(P-value) = -269.353

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: