Detailed information of matrix profile UN0356.1

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Profile summary

Name: AT5G05550
Matrix ID: UN0356.1
Class: MADS box factors
Family:
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q9FFG0  
Source: 27203113
Comment: not supported by literature

Sequence logo

Frequency matrix

         
A [ 506 683 299 65 191 57 4 8 15 1797 351 1099 710 ]
C [ 796 377 428 2037 10 2017 2281 0 15 328 43 327 463 ]
G [ 289 641 208 68 2038 119 0 2283 2244 13 1863 390 280 ]
T [ 707 597 1363 128 59 105 13 7 24 160 41 482 845 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0356.1 UN0356 1 AT5G05550 Arabidopsis thaliana
MADS box factors
     

log(P-value) = -1192.49

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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