Detailed information of matrix profile UN0360.1

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Profile summary

Name: CDF5
Matrix ID: UN0360.1
Class: C2H2 zinc finger factors
Family: Dof-type
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q9SEZ3  
Source: 27203113
Comment: not supported by literature

Sequence logo

Frequency matrix

         
A [ 914 1646 0 0 1 1 19 0 1169 1388 ]
C [ 985 724 3821 0 0 0 0 0 926 645 ]
G [ 325 510 0 0 0 0 0 0 900 482 ]
T [ 1597 941 0 3821 3820 3820 3802 3821 826 1306 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0360.1 UN0360 1 CDF5 Arabidopsis thaliana
Dof-type C2H2 zinc finger factors
     

log(P-value) = -1334.05

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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