Detailed information of matrix profile UN0376.1

  1. Home
  2. Matrix > UN0376.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: NAC053
Matrix ID: UN0376.1
Class: NAC/NAM
Family:
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q949N0  
Source: 27203113
Comment: not supported by literature

Sequence logo

Frequency matrix

         
A [ 1348 901 1020 96 249 537 32 31 43 27 820 1093 ]
C [ 812 687 640 21 17 50 3927 8 38 2 960 639 ]
G [ 634 1249 1483 31 56 134 2 161 8 3931 799 1073 ]
T [ 1168 1125 819 3814 3640 3241 1 3762 3873 2 1383 1157 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0376.1 UN0376 1 NAC053 Arabidopsis thaliana
NAC/NAM
     

log(P-value) = -3273.37

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: