Detailed information of matrix profile UN0381.1

  1. Home
  2. Matrix > UN0381.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: ZAT6
Matrix ID: UN0381.1
Class: C2H2 zinc finger factors
Family:
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: O22533  
Source: 27203113
Comment: not supported by literature

Sequence logo

Frequency matrix

         
A [ 3205 2318 1077 8080 8084 182 317 8247 575 647 2681 2958 ]
C [ 1611 1824 5912 213 173 82 7885 45 164 310 1459 1391 ]
G [ 1165 1175 410 77 37 56 40 82 170 393 1840 1418 ]
T [ 2603 3267 1185 214 290 8264 342 210 7675 7234 2604 2817 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0381.1 UN0381 1 ZAT6 Arabidopsis thaliana
C2H2 zinc finger factors
     

log(P-value) = -1375.03

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: