JASPAR Collection PHYLOFACTS

Total 174 profiles

Display profiles
ID Name JASPAR TRANSFAC Sequence logo
PF0061.1 YTAATTAA - LHX3
PF0062.1 SMTTTTGT - -
PF0063.1 AAGWWRNYGGC - -
PF0064.1 TTANTCA - AP-1(*)
PF0065.1 ARGGGTTAA - FXR(*)
PF0066.1 RACTNNRTTTNC - -
PF0067.1 TGANNYRGCA - TCF11/MAFG
PF0068.1 RGAANNTTC - HSF1
PF0069.1 SGCGSSAAA - E2F-1/DP-2
PF0070.1 CGTSACG - PAX-3
Showing 10 profiles of page 7 from 18 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.


You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)

Relative profile score threshold %

Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.


Create models with permuted columns from selected models.


Download the PFMs of the model(s) selected in four different formats.