Detailed information of matrix profile MA0108.1

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Profile summary
Name: TBP
Matrix ID: MA0108.1
Class: TATA-binding proteins
Family: TBP-related factors
Collection: CORE
Taxon: Vertebrates
Species:
Data Type:
Validation: 2329577
Uniprot ID:
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 61 16 352 3 354 268 360 222 155 56 83 82 82 68 77 ]
C [ 145 46 0 10 0 0 3 2 44 135 147 127 118 107 101 ]
G [ 152 18 2 2 5 0 10 44 157 150 128 128 128 139 140 ]
T [ 31 309 35 374 30 121 6 121 33 48 31 52 61 75 71 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0108.1 MA0108 1 TBP TBP-related factors TATA-binding proteins
MA0108.2 MA0108 2 TBP TBP-related factors TATA-binding proteins
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: