Detailed information of matrix profile MA0161.2

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Profile summary
Name: NFIC
Matrix ID: MA0161.2
Class: SMAD/NF-1 DNA-binding domain factors
Family: Nuclear factor 1
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 12101405
Uniprot ID: P08651  
Source: 29126285
Comment:

Sequence logo

Frequency matrix

         
A [ 2615 3896 412 154 352 310 223 264 10158 2626 3344 ]
C [ 2647 2137 10542 303 333 129 121 10725 397 2951 2712 ]
G [ 2478 2086 329 369 177 11087 10973 88 478 3186 2760 ]
T [ 3867 3488 324 10781 10745 81 290 530 574 2844 2791 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0161.1 MA0161 1 NFIC Homo sapiens
Nuclear factor 1 SMAD/NF-1 DNA-binding domain factors
MA0161.2 MA0161 2 NFIC Homo sapiens
Nuclear factor 1 SMAD/NF-1 DNA-binding domain factors
     

log(P-value) = -2055.67

TFFM details

TFFM ID: TFFM0072.2

ChIP-seq Centrality
log(P-value): -6247.73

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0072.2

ChIP-seq Centrality
log(P-value): -6323.29

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: