Detailed information of matrix profile MA0162.1

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Profile summary
Name: Egr1
Matrix ID: MA0162.1
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: bacterial 1-hybrid
Validation: 16041365
Uniprot ID: P08046  
Source:
Comment: aka Zif268

Sequence logo

Frequency matrix

         
A [ 3 2 0 0 0 3 1 0 2 0 1 ]
C [ 4 1 13 0 0 0 0 0 10 0 0 ]
G [ 1 12 0 15 3 12 14 15 0 15 7 ]
T [ 7 0 2 0 12 0 0 0 3 0 7 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0162.1 MA0162 1 Egr1 Mus musculus
Three-zinc finger Kruppel-related factors C2H2 zinc finger factors
MA0162.2 MA0162 2 EGR1 Homo sapiens
Three-zinc finger Kruppel-related factors C2H2 zinc finger factors
MA0162.3 MA0162 3 EGR1 Homo sapiens
Three-zinc finger Kruppel-related factors C2H2 zinc finger factors
MA0162.4 MA0162 4 EGR1 Homo sapiens
Three-zinc finger Kruppel-related factors C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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