Detailed information of matrix profile MA0328.1

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Profile summary
Name: MATALPHA2
Matrix ID: MA0328.1
Class: Homeo domain factors
Family: TALE-type homeo domain factors
Collection: CORE
Taxon: Fungi
Species: Saccharomyces cerevisiae
Data Type: COMPILED
Validation: 10487868
Uniprot ID: P0CY08  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 0 9 0 0 0 10 9 4 0 ]
C [ 10 0 0 0 0 0 1 0 0 ]
G [ 0 2 0 11 0 0 0 0 0 ]
T [ 1 0 11 0 11 1 1 7 11 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0328.1 MA0328 1 MATALPHA2 Saccharomyces cerevisiae
TALE-type homeo domain factors Homeo domain factors
MA0328.2 MA0328 2 MATALPHA2 Saccharomyces cerevisiae S288c
TALE-type homeo domain factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: