Detailed information of matrix profile MA0482.1

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Profile summary
Name: Gata4
Matrix ID: MA0482.1
Class: Other C4 zinc finger-type factors
Family: GATA-type zinc fingers
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 7791790
Uniprot ID: Q08369  
Source: PAZAR
Comment:

Sequence logo

Frequency matrix

         
A [ 10 0 0 0 2707 0 0 547 0 601 386 ]
C [ 1039 2165 89 0 39 0 2746 0 1240 1004 929 ]
G [ 374 306 0 0 0 0 0 0 940 157 682 ]
T [ 1323 275 2657 2746 0 2746 0 2199 566 984 749 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0482.1 MA0482 1 Gata4 Mus musculus
GATA-type zinc fingers Other C4 zinc finger-type factors
MA0482.2 MA0482 2 GATA4 Homo sapiens
GATA-type zinc fingers Other C4 zinc finger-type factors
     

log(P-value) = -1496

TFFM details

TFFM ID: TFFM0043.1

ChIP-seq Centrality
log(P-value): -1851.06

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0043.1

ChIP-seq Centrality
log(P-value): -1672.33

TFFM detailed summary logos

Description: GATA binding protein 4

Alias: -

Symbol: GATA4

Consensus:

Included Models:

GC Content: