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Detailed information of matrix profile
MA1695.1
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Matrix > MA1695.1
Profile summary
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Name:
ARF36
Matrix ID:
MA1695.1
Class:
B3 domain
Family:
Collection:
CORE
Taxon:
Plants
Species:
Zea mays
Data Type:
DAP-seq
Validation:
24485461
Uniprot ID:
Source:
30375394
Comment:
The motif matches the TGTC core motif associated to ARF TFs.
Sequence logo
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Frequency matrix
JASPAR
TRANSFAC
MEME
RAW PFM
Reverse comp.
A [
4333
1572
1106
438
526
1507
541
10483
82
10839
3409
935
1087
1273
]
C [
1368
6035
795
121
86
130
120
87
11032
53
4456
1586
1444
6723
]
G [
4470
1646
8866
10453
10568
9538
10495
652
83
316
595
7323
2452
759
]
T [
1079
1997
483
238
70
75
94
28
53
42
2790
1406
6267
2495
]
Binding sites information
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Version information
ChIP-seq centrality
First order TFFM
Detailed TFFM
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More details
Matrix ID
Base ID
Version
Name
Species
Family
Class
Sequence logo
MA1695.1
MA1695
1
ARF36
Zea mays
B3 domain
JASPAR
TRANSFAC
MEME
RAW PFM
log(P-value) = -18594.9
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Description:
Alias:
Symbol:
Consensus:
Included Models:
GC Content: