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Detailed information of matrix profile
MA1698.1
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Matrix > MA1698.1
Profile summary
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Name:
ARF7
Matrix ID:
MA1698.1
Class:
B3 domain
Family:
Collection:
CORE
Taxon:
Plants
Species:
Zea mays
Data Type:
DAP-seq
Validation:
24485461
Uniprot ID:
D9HNT4
Source:
30375394
Comment:
The motif matches the TGTC core motif associated to ARF TFs.
Sequence logo
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Frequency matrix
JASPAR
TRANSFAC
MEME
RAW PFM
Reverse comp.
A [
1740
775
1321
251
113
141
83
3801
18
2657
3150
419
771
798
]
C [
1003
1727
502
317
3717
3801
120
46
3917
173
457
529
970
1001
]
G [
752
745
463
3325
135
64
3799
176
76
1196
229
2904
1756
735
]
T [
570
818
1779
172
100
59
63
42
54
39
229
213
568
1531
]
Binding sites information
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Version information
ChIP-seq centrality
First order TFFM
Detailed TFFM
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More details
Matrix ID
Base ID
Version
Name
Species
Family
Class
Sequence logo
MA1698.1
MA1698
1
ARF7
Zea mays
B3 domain
JASPAR
TRANSFAC
MEME
RAW PFM
log(P-value) = -1533.03
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Description:
Alias:
Symbol:
Consensus:
Included Models:
GC Content: