Detailed information of matrix profile PB0028.1

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Profile summary
Name: Hbp1_1
Matrix ID: PB0028.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q8R316  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 28 22 22 73 2 1 4 98 2 2 1 94 34 33 23 32 ]
C [ 24 26 44 4 7 23 93 0 0 1 64 0 10 19 23 16 ]
G [ 26 15 15 11 4 0 2 0 0 0 33 2 14 18 30 18 ]
T [ 22 37 19 11 87 76 1 1 97 97 2 3 41 30 24 35 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0028.1 PB0028 1 Hbp1_1 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: