Detailed information of matrix profile PB0059.1

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Profile summary
Name: Six6_1
Matrix ID: PB0059.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q9QZ28  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 32 40 36 38 12 2 15 0 97 0 1 94 26 35 24 35 18 ]
C [ 16 17 6 15 3 2 1 0 0 0 97 1 32 17 14 22 21 ]
G [ 29 11 18 34 82 92 84 5 3 0 0 3 8 18 14 17 17 ]
T [ 23 32 40 14 3 3 0 95 0 99 2 2 34 30 48 26 43 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0059.1 PB0059 1 Six6_1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: