Detailed information of matrix profile PB0064.1

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Profile summary
Name: Sox14_1
Matrix ID: PB0064.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q04892  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 19 27 22 58 90 9 19 79 2 77 86 5 37 44 26 27 ]
C [ 14 31 22 10 3 2 2 1 18 2 3 1 10 11 8 29 ]
G [ 36 12 19 9 1 3 2 18 1 2 2 3 13 15 32 21 ]
T [ 30 30 38 23 5 86 77 2 79 19 9 90 40 29 34 23 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0064.1 PB0064 1 Sox14_1 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

Included Models:

GC Content: