Detailed information of matrix profile PH0027.1

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Profile summary
Name: Emx2
Matrix ID: PH0027.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q04744  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 48 26 28 38 3 2 88 98 1 0 95 23 2 12 14 27 18 ]
C [ 8 34 37 20 68 4 11 1 0 0 0 6 39 15 25 26 32 ]
G [ 5 33 24 33 6 0 0 0 1 11 4 68 5 48 50 21 23 ]
T [ 38 7 11 10 23 95 0 1 98 88 2 3 54 25 11 26 28 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0027.1 PH0027 1 Emx2 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: