Detailed information of matrix profile PH0063.1

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Profile summary
Name: Hoxb8
Matrix ID: PH0063.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P09632  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 40 17 18 23 11 1 78 97 2 19 96 79 10 60 40 45 ]
C [ 23 43 36 17 3 62 16 1 0 1 0 4 24 14 13 10 ]
G [ 9 30 20 34 82 0 2 1 0 0 1 2 7 13 32 12 ]
T [ 29 10 27 26 4 36 4 1 98 80 3 15 59 13 14 32 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0063.1 PH0063 1 Hoxb8 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: