Detailed information of matrix profile PH0107.1

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Profile summary
Name: Msx2
Matrix ID: PH0107.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q03358  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 28 38 44 14 70 2 1 99 99 1 1 96 15 11 16 25 9 ]
C [ 26 28 12 23 8 80 56 0 1 0 1 0 5 42 10 36 21 ]
G [ 31 18 24 54 13 11 0 0 0 0 0 4 56 8 47 11 11 ]
T [ 16 16 20 9 9 7 43 1 0 99 98 1 24 39 27 28 58 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0107.1 PH0107 1 Msx2 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: